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  5. PSME_00014833-RA

PSME_00014833-RA


Description : (at5g48390 : 619.0) Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.; ATZIP4; FUNCTIONS IN: binding; INVOLVED IN: female meiosis, resolution of meiotic recombination intermediates, male meiosis; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Meiosis specific protein SPO22 (InterPro:IPR013940), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 1238.0) & (original description: no original description)


Gene families : OG_42_0006535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014833-RA
Cluster HCCA clusters: Cluster_185


Type GO Term Name Evidence Source
BP GO:0051321 meiotic cell cycle IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013940 Spo22/ZIP4/TEX11 186 407
No external refs found!