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  5. PSME_00014854-RA

PSME_00014854-RA


Description : (at4g36360 : 125.0) putative beta-galactosidase (BGAL3 gene); beta-galactosidase 3 (BGAL3); FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1); Has 2405 Blast hits to 2192 proteins in 479 species: Archae - 15; Bacteria - 1021; Metazoa - 436; Fungi - 211; Plants - 628; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (p45582|bgal_aspof : 117.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (reliability: 250.0) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014854-RA
Cluster HCCA clusters: Cluster_414

Target Alias Description ECC score Gene Family Method Actions
413650 No alias beta-galactosidase 8 0.04 Orthogroups_2024-Update
Brara.C04158.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.D01993.1 No alias beta-galactosidase *(BGAL9) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Glyma.07G010400 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Glyma.08G193500 No alias beta galactosidase 1 0.01 Orthogroups_2024-Update
Glyma.09G062900 No alias beta-galactosidase 12 0.01 Orthogroups_2024-Update
Glyma.11G107600 No alias glycosyl hydrolase family 35 protein 0.01 Orthogroups_2024-Update
Glyma.13G104000 No alias beta galactosidase 1 0.02 Orthogroups_2024-Update
Glyma.17G047401 No alias beta-galactosidase 15 0.01 Orthogroups_2024-Update
LOC_Os01g39830 No alias beta-galactosidase, putative, expressed 0.01 Orthogroups_2024-Update
MA_10435640g0010 No alias (at3g13750 : 326.0) beta-galactosidase, glycosyl... 0.03 Orthogroups_2024-Update
PSME_00030788-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 91 133
No external refs found!