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Description : (at2g21940 : 83.2) shikimate kinase 1 (SK1); FUNCTIONS IN: shikimate kinase activity, ATP binding; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2); Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26; Bacteria - 5482; Metazoa - 44; Fungi - 134; Plants - 162; Viruses - 0; Other Eukaryotes - 1983 (source: NCBI BLink). & (reliability: 166.4) & (original description: no original description)
Gene families : OG_42_0002393 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002393_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00014866-RA | |
| Cluster | HCCA clusters: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre10.g436350 | No alias | shikimate kinase 1 | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031322 | Shikimate/glucono_kinase | 23 | 72 |
| No external refs found! |