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  5. Sopen05g026960

Sopen05g026960


Description : Receptor family ligand binding region


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g026960
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_28967 No alias glutamate receptor 2.8 0.04 Orthogroups_2024-Update
A4A49_42200 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
At2g17260 No alias glutamate receptor 2 [Source:TAIR;Acc:AT2G17260] 0.03 Orthogroups_2024-Update
Bradi3g53690 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Bradi5g19560 No alias glutamate receptor 3.3 0.02 Orthogroups_2024-Update
Brara.C01650.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.D01500.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.G00725.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Brara.H00536.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.I05466.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Brara.J00340.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
GRMZM2G066489 No alias glutamate receptor 3.3 0.02 Orthogroups_2024-Update
GRMZM2G139933 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
GRMZM2G148807 No alias glutamate receptor 3.4 0.03 Orthogroups_2024-Update
Glyma.01G157900 No alias glutamate receptor 3.6 0.03 Orthogroups_2024-Update
Glyma.07G226400 No alias glutamate receptor 2.8 0.08 Orthogroups_2024-Update
Glyma.13G233400 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Glyma.14G001100 No alias glutamate receptor 2 0.02 Orthogroups_2024-Update
PSME_00009649-RA No alias (at4g35290 : 475.0) Encodes a putative glutamate... 0.03 Orthogroups_2024-Update
PSME_00010771-RA No alias (at1g42540 : 809.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00020112-RA No alias (at1g42540 : 726.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00021964-RA No alias (at1g05200 : 282.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00038557-RA No alias (at1g42540 : 140.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00050642-RA No alias (q7xp59|glr31_orysa : 567.0) Glutamate receptor 3.1... 0.06 Orthogroups_2024-Update
Potri.004G052400 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
Potri.009G168300 No alias glutamate receptor 2 0.02 Orthogroups_2024-Update
Potri.014G152200 No alias glutamate receptor 3.4 0.02 Orthogroups_2024-Update
Sobic.006G193200.3 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
Sobic.010G231300.1 No alias ligand-gated cation channel *(GLR) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 817 848
IPR001828 ANF_lig-bd_rcpt 57 413
IPR001638 Solute-binding_3/MltF_N 494 816
No external refs found!