Description : (at4g13650 : 307.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (reliability: 614.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00014882-RA | |
Cluster | HCCA clusters: Cluster_534 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_13653 | No alias | pentatricopeptide repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
A4A49_19306 | No alias | pentatricopeptide repeat-containing protein,... | 0.01 | Orthogroups_2024-Update | |
At3g46790 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.01 | Orthogroups_2024-Update | |
At4g21300 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.01 | Orthogroups_2024-Update | |
Bradi1g68478 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
Brara.F01301.1 | No alias | RNA editing factor *(OTP970) | 0.01 | Orthogroups_2024-Update | |
GRMZM2G029859 | No alias | dynamin-like protein 6 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G057176 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Orthogroups_2024-Update | |
GRMZM2G332843 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Orthogroups_2024-Update | |
Glyma.01G048100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Orthogroups_2024-Update | |
Glyma.02G174500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G313300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.14G224400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G080810.1 | No alias | RNA editing factor *(MEF10) | 0.02 | Orthogroups_2024-Update | |
MA_10429371g0010 | No alias | (at3g57430 : 716.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
MA_10429837g0010 | No alias | (at1g11290 : 623.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
MA_525914g0010 | No alias | (at1g11290 : 644.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00002640-RA | No alias | (at4g13650 : 724.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00026226-RA | No alias | (at3g46790 : 588.0) Encodes a member of a PCMP (plant... | 0.02 | Orthogroups_2024-Update | |
PSME_00036565-RA | No alias | (at4g18750 : 575.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
PSME_00042901-RA | No alias | (at4g33170 : 526.0) Tetratricopeptide repeat (TPR)-like... | 0.05 | Orthogroups_2024-Update | |
PSME_00051747-RA | No alias | (at1g11290 : 641.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
Seita.3G126600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.003G109000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G282000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.007G137800.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G079400.1 | No alias | RNA editing factor *(ECD1) | 0.01 | Orthogroups_2024-Update | |
Solyc02g081900 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc09g065710 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
Solyc10g054730 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen01g037380 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen01g041720 | No alias | PPR repeat family | 0.01 | Orthogroups_2024-Update | |
Sopen02g026530 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen11g024580 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |