1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00014975-RA

PSME_00014975-RA


Description : (at1g64060 : 229.0) Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.; respiratory burst oxidase protein F (RBOH F); FUNCTIONS IN: NAD(P)H oxidase activity; INVOLVED IN: in 10 processes; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), NADPH oxidase Respiratory burst (InterPro:IPR013623), Ferric reductase, NAD binding (InterPro:IPR013121), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: Riboflavin synthase-like superfamily protein (TAIR:AT4G11230.1); Has 2419 Blast hits to 2261 proteins in 348 species: Archae - 6; Bacteria - 265; Metazoa - 742; Fungi - 676; Plants - 525; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)


Gene families : OG_42_0000215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00014975-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
235874 No alias respiratory burst oxidase protein F 0.02 Orthogroups_2024-Update
A4A49_15438 No alias respiratory burst oxidase-like protein e 0.03 Orthogroups_2024-Update
At5g47910 No alias Respiratory burst oxidase homolog protein D... 0.02 Orthogroups_2024-Update
At5g60010 No alias Putative respiratory burst oxidase homolog protein H... 0.03 Orthogroups_2024-Update
Bradi4g17020 No alias respiratory burst oxidase homologue D 0.03 Orthogroups_2024-Update
Brara.B01052.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Brara.I05278.1 No alias NADPH-oxidase *(Rboh) 0.02 Orthogroups_2024-Update
Brara.K01415.1 No alias NADPH-oxidase *(Rboh) 0.02 Orthogroups_2024-Update
GRMZM2G037993 No alias respiratory burst oxidase homologue D 0.02 Orthogroups_2024-Update
GRMZM2G441541 No alias respiratory burst oxidase homologue D 0.03 Orthogroups_2024-Update
Glyma.07G130800 No alias ferric reductase-like transmembrane component family protein 0.04 Orthogroups_2024-Update
Glyma.15G182000 No alias Riboflavin synthase-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G069780.1 No alias respiratory burst NADPH oxidase *(SGN4) & NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Kfl00159_0040 kfl00159_0040_v1.1 (at1g64060 : 146.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
LOC_Os08g35210 No alias ferric reductase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427209g0020 No alias (at1g64060 : 925.0) Interacts with AtrbohD gene to fine... 0.04 Orthogroups_2024-Update
MA_10429792g0020 No alias (at1g64060 : 456.0) Interacts with AtrbohD gene to fine... 0.04 Orthogroups_2024-Update
MA_18674g0010 No alias (at1g64060 : 1149.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
PSME_00000812-RA No alias (at1g64060 : 188.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
PSME_00017164-RA No alias (at1g64060 : 563.0) Interacts with AtrbohD gene to fine... 0.03 Orthogroups_2024-Update
Potri.012G111600 No alias NADPH/respiratory burst oxidase protein D 0.02 Orthogroups_2024-Update
Seita.8G129100.1 No alias NADPH-oxidase *(Rboh) 0.02 Orthogroups_2024-Update
Seita.8G141900.1 No alias NADPH-oxidase *(Rboh) 0.03 Orthogroups_2024-Update
Sobic.003G161500.3 No alias NADPH-oxidase *(Rboh) 0.02 Orthogroups_2024-Update
Solyc03g117980 No alias whitefly-induced gp91-phox 0.04 Orthogroups_2024-Update
Solyc05g025680 No alias Respiratory burst oxidase, putative (AHRD V3.3 *-* B9RR53_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013121 Fe_red_NAD-bd_6 45 172
No external refs found!