PSME_00015358-RA

Description : (at5g20480 : 637.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 456.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1274.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00015358-RA
Cluster	HCCA clusters: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g47990	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
Bradi3g48760	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Bradi3g48790	No alias	Leucine-rich repeat protein kinase family protein	0.04	Orthogroups_2024-Update
Bradi4g03660	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Bradi4g11740	No alias	Leucine-rich repeat protein kinase family protein	0.04	Orthogroups_2024-Update
Bradi4g12990	No alias	Leucine-rich repeat protein kinase family protein	0.05	Orthogroups_2024-Update
Bradi4g16068	No alias	Leucine-rich repeat protein kinase family protein	0.04	Orthogroups_2024-Update
Bradi5g03977	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
Brara.E02261.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Brara.H00180.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Glyma.09G216400	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.13G268100	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G122950.2	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
HORVU6Hr1G057240.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
LOC_Os02g40130	No alias	leucine-rich, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g07200	No alias	receptor protein kinase CLAVATA1 precursor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g36140	No alias	receptor-like protein kinase 2 precursor, putative, expressed	0.03	Orthogroups_2024-Update
MA_10237903g0010	No alias	(at3g47570 : 172.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_10428901g0010	No alias	(at2g24130 : 511.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
MA_10430058g0010	No alias	(at3g11080 : 114.0) receptor like protein 35 (RLP35);...	0.03	Orthogroups_2024-Update
MA_10437059g0020	No alias	(at3g47110 : 634.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_11052g0010	No alias	(at2g24130 : 556.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_150750g0010	No alias	(at3g47110 : 429.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_160382g0020	No alias	(at2g24130 : 338.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_166390g0010	No alias	(at1g63430 : 96.3) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_37456g0020	No alias	(at3g47090 : 158.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_485554g0010	No alias	(at5g20480 : 140.0) Encodes a predicted leucine-rich...	0.04	Orthogroups_2024-Update
MA_61359g0010	No alias	(at1g34110 : 339.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_723275g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_74345g0010	No alias	(at3g47570 : 206.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_7910488g0010	No alias	(at3g47110 : 125.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_81952g0010	No alias	(at5g46330 : 205.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
MA_8334663g0010	No alias	(at5g20480 : 141.0) Encodes a predicted leucine-rich...	0.03	Orthogroups_2024-Update
PSME_00002258-RA	No alias	(at3g47570 : 249.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00002800-RA	No alias	(at3g47110 : 604.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00008690-RA	No alias	(at3g47570 : 218.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00014185-RA	No alias	(at3g24240 : 256.0) Leucine-rich repeat receptor-like...	0.05	Orthogroups_2024-Update
PSME_00018686-RA	No alias	(at3g47110 : 573.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00019141-RA	No alias	(at3g51740 : 96.7) encodes a leucine-repeat receptor...	0.04	Orthogroups_2024-Update
PSME_00024176-RA	No alias	(at4g20140 : 447.0) Encodes GASSHO1 (GSO1), a putative...	0.05	Orthogroups_2024-Update
PSME_00025380-RA	No alias	(at3g24240 : 244.0) Leucine-rich repeat receptor-like...	0.05	Orthogroups_2024-Update
PSME_00027031-RA	No alias	(at3g47570 : 470.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00031091-RA	No alias	(at5g46330 : 205.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00032479-RA	No alias	(at3g47110 : 608.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00032507-RA	No alias	(at5g46330 : 369.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
PSME_00035635-RA	No alias	(at3g47110 : 648.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00038472-RA	No alias	(at5g46330 : 359.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00039331-RA	No alias	(at3g47110 : 609.0) Leucine-rich repeat protein kinase...	0.07	Orthogroups_2024-Update
PSME_00039609-RA	No alias	(at2g24130 : 270.0) Leucine-rich receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00039997-RA	No alias	(at2g24130 : 449.0) Leucine-rich receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00040102-RA	No alias	(at2g24130 : 93.6) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00041027-RA	No alias	(at3g24240 : 280.0) Leucine-rich repeat receptor-like...	0.06	Orthogroups_2024-Update
PSME_00041792-RA	No alias	(at3g47110 : 607.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00043336-RA	No alias	(at4g20140 : 343.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00043437-RA	No alias	(at3g12610 : 154.0) Plays role in DNA-damage...	0.04	Orthogroups_2024-Update
PSME_00044948-RA	No alias	(at3g47110 : 644.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00048631-RA	No alias	(at5g46330 : 300.0) Encodes a leucine-rich repeat...	0.07	Orthogroups_2024-Update
PSME_00051838-RA	No alias	(at2g24130 : 524.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00053239-RA	No alias	(at4g20140 : 438.0) Encodes GASSHO1 (GSO1), a putative...	0.03	Orthogroups_2024-Update
PSME_00053750-RA	No alias	(at4g20140 : 428.0) Encodes GASSHO1 (GSO1), a putative...	0.05	Orthogroups_2024-Update
PSME_00054630-RA	No alias	(at3g47110 : 558.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
PSME_00055178-RA	No alias	(at5g46330 : 248.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00055531-RA	No alias	(at5g46330 : 107.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
Potri.006G099100	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
Potri.018G020000	No alias	Leucine-rich repeat protein kinase family protein	0.04	Orthogroups_2024-Update
Seita.3G396700.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.4G231800.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.003G067600.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.003G068200.3	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.004G214900.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.004G217500.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.005G131600.2	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.04	Orthogroups_2024-Update
Sobic.008G174966.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Solyc02g031790	No alias	Receptor-like protein kinase (AHRD V3.3 *** RPK1_IPONI)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	284	342
IPR001611	Leu-rich_rpt	455	493
IPR001611	Leu-rich_rpt	557	614
IPR001611	Leu-rich_rpt	386	445
IPR000719	Prot_kinase_dom	741	948
IPR013210	LRR_N_plant-typ	49	85

External Links

No external refs found!

PSME_00015358-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation