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  5. PSME_00015410-RA

PSME_00015410-RA


Description : (at5g61930 : 368.0) ACCUMULATION OF PHOTOSYSTEM ONE 3; ACCUMULATION OF PHOTOSYSTEM ONE 3 (APO3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 674.0) & (original description: no original description)


Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00015410-RA
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
MA_45379g0010 No alias (at3g21740 : 316.0) ACCUMULATION OF PHOTOSYSTEM ONE 4;... 0.03 Orthogroups_2024-Update
PSME_00004747-RA No alias (at5g61930 : 320.0) ACCUMULATION OF PHOTOSYSTEM ONE 3;... 0.05 Orthogroups_2024-Update
PSME_00034300-RA No alias (at5g61930 : 382.0) ACCUMULATION OF PHOTOSYSTEM ONE 3;... 0.04 Orthogroups_2024-Update
Potri.016G001400 No alias Arabidopsis thaliana protein of unknown function (DUF794) 0.02 Orthogroups_2024-Update
Potri.017G037200 No alias Arabidopsis thaliana protein of unknown function (DUF794) 0.02 Orthogroups_2024-Update
Seita.1G309900.1 No alias organelle RNA splicing factor *(APO) 0.03 Orthogroups_2024-Update
Seita.7G236600.1 No alias organelle RNA splicing factor *(APO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR023342 APO_dom 304 420
IPR023342 APO_dom 69 257
No external refs found!