Description : (at3g28345 : 1293.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1276.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2586.0) & (original description: no original description)
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00015427-RA | |
Cluster | HCCA clusters: Cluster_131 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
169182 | No alias | ATP binding cassette subfamily B4 | 0.02 | Orthogroups_2024-Update | |
408755 | No alias | P-glycoprotein 18 | 0.02 | Orthogroups_2024-Update | |
410515 | No alias | ATP binding cassette subfamily B19 | 0.02 | Orthogroups_2024-Update | |
A4A49_25017 | No alias | abc transporter b family member 9 | 0.02 | Orthogroups_2024-Update | |
Glyma.16G078100 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Mp2g11920.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
PSME_00004142-RA | No alias | (q6yuu5|mdr_orysa : 1178.0) Putative multidrug... | 0.01 | Orthogroups_2024-Update | |
PSME_00018696-RA | No alias | (at3g62150 : 453.0) P-glycoprotein 21 (PGP21); FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
PSME_00020852-RA | No alias | (at3g28345 : 1431.0) ABC transporter family protein;... | 0.01 | Orthogroups_2024-Update | |
PSME_00043262-RA | No alias | (at3g28345 : 1088.0) ABC transporter family protein;... | 0.03 | Orthogroups_2024-Update | |
Pp1s391_45V6 | No alias | multidrug pheromone mdr abc transporter family | 0.02 | Orthogroups_2024-Update | |
Solyc06g009280 | No alias | ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Sopen09g003060 | No alias | ABC transporter transmembrane region | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_4436.1 | No alias | (at2g47000 : 931.0) Multidrug resistance P-glycoprotein... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004126 | cytidine deaminase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0006216 | cytidine catabolic process | IEP | Predicted GO |
MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
BP | GO:0009164 | nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0009972 | cytidine deamination | IEP | Predicted GO |
MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Predicted GO |
BP | GO:0042454 | ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046087 | cytidine metabolic process | IEP | Predicted GO |
BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901658 | glycosyl compound catabolic process | IEP | Predicted GO |
No external refs found! |