Description : (at4g10110 : 132.0) RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G18510.1); Has 3478 Blast hits to 3175 proteins in 382 species: Archae - 0; Bacteria - 389; Metazoa - 1438; Fungi - 566; Plants - 665; Viruses - 0; Other Eukaryotes - 420 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)
Gene families : OG_42_0004643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004643_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00015563-RA | |
Cluster | HCCA clusters: Cluster_185 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi2g56662 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Orthogroups_2024-Update | |
Seita.5G400000.1 | No alias | component *(RBM7) of Nuclear Exosome Targeting (NEXT)... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Predicted GO |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Predicted GO |
MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
MF | GO:0005102 | signaling receptor binding | IEP | Predicted GO |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
CC | GO:0005875 | microtubule associated complex | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0007049 | cell cycle | IEP | Predicted GO |
MF | GO:0008083 | growth factor activity | IEP | Predicted GO |
BP | GO:0008283 | cell proliferation | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
CC | GO:0030286 | dynein complex | IEP | Predicted GO |
MF | GO:0030545 | receptor regulator activity | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
MF | GO:0048018 | receptor ligand activity | IEP | Predicted GO |
MF | GO:0050290 | sphingomyelin phosphodiesterase D activity | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051321 | meiotic cell cycle | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 9 | 72 |
No external refs found! |