1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00015651-RA

PSME_00015651-RA


Description : (at1g26850 : 256.0) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: Golgi apparatus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G18030.1); Has 1039 Blast hits to 1012 proteins in 98 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 910; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). & (reliability: 512.0) & (original description: no original description)


Gene families : OG_42_0000319 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00015651-RA
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
143797 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
A4A49_04267 No alias putative methyltransferase pmt18 0.02 Orthogroups_2024-Update
LOC_Os06g03750 No alias dehydration response related protein, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s235_40V6 No alias atp binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 132 251
IPR004159 Put_SAM_MeTrfase 254 352
No external refs found!