PSME_00015911-RA

Description : (at3g04070 : 259.0) NAC domain containing protein 47 (NAC047); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC-like, activated by AP3/PI (TAIR:AT1G69490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q52qh4|nac68_orysa : 233.0) NAC domain-containing protein 68 (ONAC068) - Oryza sativa (Rice) & (reliability: 518.0) & (original description: no original description)

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00015911-RA
Cluster	HCCA clusters: Cluster_310

Target	Alias	Description	ECC score	Gene Family Method
A4A49_31784	No alias	nac domain-containing protein 35	0.03	Orthogroups_2024-Update
Bradi1g17480	No alias	NAC domain containing protein 47	0.02	Orthogroups_2024-Update
Brara.F00162.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.06G248900	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
HORVU3Hr1G090920.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g21060	No alias	No apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g34600	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00017053-RA	No alias	(at1g01720 : 241.0) Belongs to a large family of...	0.05	Orthogroups_2024-Update
PSME_00017634-RA	No alias	(q52qh4\|nac68_orysa : 241.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
PSME_00019789-RA	No alias	(at3g15510 : 264.0) Note of caution: not to be confused...	0.03	Orthogroups_2024-Update
PSME_00020753-RA	No alias	(q52qh4\|nac68_orysa : 271.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00025049-RA	No alias	(q52qh4\|nac68_orysa : 235.0) NAC domain-containing...	0.04	Orthogroups_2024-Update
PSME_00027176-RA	No alias	(at1g52880 : 226.0) Transcription factor with a NAC...	0.05	Orthogroups_2024-Update
PSME_00035542-RA	No alias	(q7f2l3\|nac48_orysa : 221.0) NAC domain-containing...	0.05	Orthogroups_2024-Update
PSME_00042313-RA	No alias	(at1g52880 : 289.0) Transcription factor with a NAC...	0.03	Orthogroups_2024-Update
PSME_00050941-RA	No alias	(at4g27410 : 250.0) Encodes a NAC transcription factor...	0.04	Orthogroups_2024-Update
PSME_00055222-RA	No alias	(at1g01720 : 234.0) Belongs to a large family of...	0.06	Orthogroups_2024-Update
Potri.006G129400	No alias	NAC domain containing protein 25	0.04	Orthogroups_2024-Update
Seita.3G237100.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.008G094700.1	No alias	NAC-type transcription factor	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	23	152

External Links

No external refs found!

PSME_00015911-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation