PSME_00016011-RA


Description : (at5g05400 : 116.0) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G63020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016011-RA
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
A4A49_01494 No alias putative disease resistance protein 0.03 Orthogroups_2024-Update
Bradi2g52150 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
LOC_Os01g57870 No alias disease resistance protein RPS2, putative, expressed 0.03 Orthogroups_2024-Update
MA_10435995g0040 No alias (at4g27190 : 188.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
MA_122523g0010 No alias (at1g12210 : 224.0) RFL1 has high sequence similarity to... 0.04 Orthogroups_2024-Update
MA_31961g0010 No alias (at5g63020 : 182.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_5183807g0010 No alias (at4g10780 : 85.5) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
MA_612817g0010 No alias (at1g61180 : 118.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
MA_8869735g0010 No alias (at1g61300 : 128.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00004005-RA No alias (at1g15890 : 219.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00009853-RA No alias (at1g12280 : 271.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00011110-RA No alias (at5g43740 : 165.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00011883-RA No alias (at4g27220 : 218.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
PSME_00048940-RA No alias (at4g27220 : 141.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00050940-RA No alias (at1g12280 : 221.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00057068-RA No alias (at4g27220 : 250.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
Potri.T013200 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.T015900 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 168 381
No external refs found!