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  5. Sopen05g027750

Sopen05g027750


Description : 3' exoribonuclease family, domain 1


Gene families : OG_42_0004209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g027750
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At3g12990 No alias Exosome complex component RRP45A... 0.02 Orthogroups_2024-Update
HORVU6Hr1G027570.6 No alias component *(RRP45) of exosome EXO9 core complex 0.03 Orthogroups_2024-Update
LOC_Os02g34570 No alias exosome complex exonuclease, putative, expressed 0.03 Orthogroups_2024-Update
Potri.009G047500 No alias 3\'-5\'-exoribonuclease family protein 0.03 Orthogroups_2024-Update
Sobic.004G173100.1 No alias component *(RRP45) of exosome EXO9 core complex 0.02 Orthogroups_2024-Update
Solyc05g047420 No alias Exosome complex component rrp45 (AHRD V3.3 *** W9RTK1_9ROSA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 197 262
IPR001247 ExoRNase_PH_dom1 37 168
No external refs found!