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  5. PSME_00016092-RA

PSME_00016092-RA


Description : (at1g69800 : 80.5) Cystathionine beta-synthase (CBS) protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase regulatory subunit gamma 1 (TAIR:AT3G48530.1); Has 884 Blast hits to 801 proteins in 238 species: Archae - 117; Bacteria - 172; Metazoa - 187; Fungi - 63; Plants - 180; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)


Gene families : OG_42_0001387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016092-RA
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
402169 No alias Cystathionine beta-synthase (CBS) protein 0.01 Orthogroups_2024-Update
Glyma.04G011966 No alias Cystathionine beta-synthase (CBS) protein 0.01 Orthogroups_2024-Update
Seita.5G237800.1 No alias regulatory subunit gamma of SnRK1 kinase complex &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!