Description : (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in cell elongation.; glycosyl hydrolase 9B1 (GH9B1); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to cyclopentenone, cell wall modification involved in multidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B6 (TAIR:AT1G23210.1); Has 1758 Blast hits to 1741 proteins in 256 species: Archae - 2; Bacteria - 589; Metazoa - 188; Fungi - 19; Plants - 920; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). & (q69nf5|gun23_orysa : 646.0) Endoglucanase 23 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 23) (OsGLU12) - Oryza sativa (Rice) & (reliability: 1348.0) & (original description: no original description)
Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00016234-RA | |
Cluster | HCCA clusters: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_19880 | No alias | endoglucanase 8 | 0.03 | Orthogroups_2024-Update | |
At1g19940 | No alias | Endoglucanase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI9] | 0.04 | Orthogroups_2024-Update | |
At1g22880 | No alias | Endoglucanase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2V4L8] | 0.03 | Orthogroups_2024-Update | |
Bradi1g54580 | No alias | cellulase 2 | 0.03 | Orthogroups_2024-Update | |
Brara.G03367.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.I01325.1 | No alias | class-C endo-1,4-beta-glucanase | 0.02 | Orthogroups_2024-Update | |
Brara.I03254.1 | No alias | class-B endo-1,4-beta-glucanase | 0.03 | Orthogroups_2024-Update | |
Cre06.g273100 | No alias | Function unknown | 0.01 | Orthogroups_2024-Update | |
MA_10430095g0010 | No alias | (at4g39000 : 336.0) glycosyl hydrolase 9B17 (GH9B17);... | 0.03 | Orthogroups_2024-Update | |
MA_10430521g0010 | No alias | (at3g43860 : 535.0) glycosyl hydrolase 9A4 (GH9A4);... | 0.03 | Orthogroups_2024-Update | |
MA_10437098g0010 | No alias | (at4g11050 : 708.0) glycosyl hydrolase 9C3 (GH9C3);... | 0.04 | Orthogroups_2024-Update | |
MA_216572g0010 | No alias | (at1g02800 : 571.0) Encodes a protein with similarity to... | 0.04 | Orthogroups_2024-Update | |
MA_42717g0010 | No alias | (at4g11050 : 801.0) glycosyl hydrolase 9C3 (GH9C3);... | 0.03 | Orthogroups_2024-Update | |
Mp8g17860.1 | No alias | Endoglucanase 3 OS=Oryza sativa subsp. japonica... | 0.02 | Orthogroups_2024-Update | |
PSME_00006676-RA | No alias | (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... | 0.03 | Orthogroups_2024-Update | |
PSME_00009215-RA | No alias | (at1g02800 : 490.0) Encodes a protein with similarity to... | 0.05 | Orthogroups_2024-Update | |
PSME_00014943-RA | No alias | (at4g02290 : 426.0) glycosyl hydrolase 9B13 (GH9B13);... | 0.04 | Orthogroups_2024-Update | |
PSME_00023038-RA | No alias | (at4g11050 : 771.0) glycosyl hydrolase 9C3 (GH9C3);... | 0.03 | Orthogroups_2024-Update | |
PSME_00033700-RA | No alias | (at4g11050 : 728.0) glycosyl hydrolase 9C3 (GH9C3);... | 0.03 | Orthogroups_2024-Update | |
PSME_00041194-RA | No alias | (at1g23210 : 550.0) glycosyl hydrolase 9B6 (GH9B6);... | 0.04 | Orthogroups_2024-Update | |
PSME_00042047-RA | No alias | (at1g02800 : 369.0) Encodes a protein with similarity to... | 0.04 | Orthogroups_2024-Update | |
Potri.003G139600 | No alias | glycosyl hydrolase 9C2 | 0.03 | Orthogroups_2024-Update | |
Pp1s100_137V6 | No alias | endo- -beta- | 0.02 | Orthogroups_2024-Update | |
Pp1s100_139V6 | No alias | endo-beta- -glucanase | 0.02 | Orthogroups_2024-Update | |
Pp1s149_10V6 | No alias | endo-beta- -glucanase | 0.03 | Orthogroups_2024-Update | |
Pp1s19_105V6 | No alias | endo-beta- -glucanase | 0.02 | Orthogroups_2024-Update | |
Pp1s376_19V6 | No alias | endo-beta- -glucanase | 0.03 | Orthogroups_2024-Update | |
Pp1s37_355V6 | No alias | endo-beta- -glucanase | 0.03 | Orthogroups_2024-Update | |
Seita.1G339700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.3G050200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G148500.1 | No alias | class-B endo-1,4-beta-glucanase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G244600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0008156 | negative regulation of DNA replication | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
BP | GO:0045005 | DNA-dependent DNA replication maintenance of fidelity | IEP | Predicted GO |
BP | GO:0048478 | replication fork protection | IEP | Predicted GO |
BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predicted GO |
BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Predicted GO |
BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001701 | Glyco_hydro_9 | 45 | 498 |
No external refs found! |