PSME_00016355-RA

Description : (at3g47570 : 606.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 486.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1212.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00016355-RA
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
A4A49_61424	No alias	putative lrr receptor-like serinethreonine-protein kinase	0.04	Orthogroups_2024-Update
Bradi4g30560	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
Brara.F01740.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Brara.I01859.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Glyma.13G371200	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
HORVU6Hr1G044140.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
LOC_Os01g05960	No alias	receptor kinase, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g49920	No alias	protein kinase, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g12040	No alias	receptor-like protein kinase precursor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g07250	No alias	receptor kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g10310	No alias	receptor-like protein kinase 2 precursor, putative, expressed	0.02	Orthogroups_2024-Update
MA_10237903g0010	No alias	(at3g47570 : 172.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_10350490g0010	No alias	(at3g47570 : 249.0) Leucine-rich repeat protein kinase...	0.06	Orthogroups_2024-Update
MA_10432898g0010	No alias	(at3g47570 : 310.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_10432906g0020	No alias	(at5g46330 : 129.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
MA_170288g0010	No alias	(at3g47570 : 496.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
MA_173608g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_180135g0010	No alias	(at3g47580 : 92.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_266307g0020	No alias	(at3g47570 : 279.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
MA_45217g0010	No alias	(at3g47570 : 301.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_45658g0010	No alias	(at5g20480 : 205.0) Encodes a predicted leucine-rich...	0.06	Orthogroups_2024-Update
MA_546916g0010	No alias	(at1g63430 : 93.6) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_7910488g0010	No alias	(at3g47110 : 125.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_8708888g0010	No alias	(at1g25320 : 155.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00006646-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00008693-RA	No alias	(at3g47570 : 355.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00014185-RA	No alias	(at3g24240 : 256.0) Leucine-rich repeat receptor-like...	0.05	Orthogroups_2024-Update
PSME_00030826-RA	No alias	(at2g24130 : 523.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00040826-RA	No alias	(at5g63930 : 192.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00042474-RA	No alias	(at3g47110 : 591.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00043488-RA	No alias	(at2g24130 : 332.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00044948-RA	No alias	(at3g47110 : 644.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00049305-RA	No alias	(at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00053239-RA	No alias	(at4g20140 : 438.0) Encodes GASSHO1 (GSO1), a putative...	0.06	Orthogroups_2024-Update
PSME_00054783-RA	No alias	(at5g07280 : 194.0) Encodes EMS1 (EXCESS...	0.06	Orthogroups_2024-Update
PSME_00055160-RA	No alias	(at5g46330 : 382.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00055387-RA	No alias	(at3g47110 : 558.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00055909-RA	No alias	(at3g47110 : 624.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00056030-RA	No alias	(at2g26330 : 241.0) Homologous to receptor protein...	0.04	Orthogroups_2024-Update
Potri.006G099100	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Potri.008G033700	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Potri.011G140900	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Seita.1G228200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.4G046400.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.4G046600.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Seita.4G231200.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.4G231800.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.04	Orthogroups_2024-Update
Seita.5G106400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G107000.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Seita.6G079200.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Seita.8G037400.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Seita.8G160700.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Sobic.005G116700.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.010G176700.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Solyc04g014200	No alias	LOW QUALITY:Non-specific serine/threonine protein kinase...	0.02	Orthogroups_2024-Update
Solyc06g006020	No alias	Non-specific serine/threonine protein kinase (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc06g006030	No alias	Receptor-like kinase (AHRD V3.3 - A0A072TRW0_MEDTR)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030117	membrane coat	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013210	LRR_N_plant-typ	25	62
IPR001611	Leu-rich_rpt	654	712
IPR001611	Leu-rich_rpt	508	567
IPR000719	Prot_kinase_dom	818	1026

External Links

No external refs found!

PSME_00016355-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation