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  5. PSME_00016573-RA

PSME_00016573-RA


Description : (at3g43860 : 521.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 516.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (reliability: 1042.0) & (original description: no original description)


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016573-RA
Cluster HCCA clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Brara.G03044.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
GRMZM2G151257 No alias glycosyl hydrolase 9B8 0.02 Orthogroups_2024-Update
GRMZM2G538064 No alias glycosyl hydrolase 9A4 0.04 Orthogroups_2024-Update
Glyma.06G025100 No alias glycosyl hydrolase 9B7 0.03 Orthogroups_2024-Update
MA_10430521g0010 No alias (at3g43860 : 535.0) glycosyl hydrolase 9A4 (GH9A4);... 0.04 Orthogroups_2024-Update
MA_697188g0010 No alias (at4g02290 : 427.0) glycosyl hydrolase 9B13 (GH9B13);... 0.04 Orthogroups_2024-Update
PSME_00001650-RA No alias (at4g11050 : 540.0) glycosyl hydrolase 9C3 (GH9C3);... 0.03 Orthogroups_2024-Update
PSME_00008280-RA No alias (at1g02800 : 594.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
Potri.008G132700 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
Potri.009G123900 No alias glycosyl hydrolase 9B18 0.03 Orthogroups_2024-Update
Potri.014G157600 No alias glycosyl hydrolase 9B8 0.02 Orthogroups_2024-Update
Pp1s100_137V6 No alias endo- -beta- 0.05 Orthogroups_2024-Update
Solyc02g014220 No alias Endoglucanase (AHRD V3.3 *** K4B4M1_SOLLC) 0.03 Orthogroups_2024-Update
Solyc07g064870 No alias Endoglucanase (AHRD V3.3 *** M1C0J8_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 32 480
No external refs found!