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  5. PSME_00016597-RA

PSME_00016597-RA


Description : (at5g46290 : 649.0) 3-ketoacyl-acyl carrier protein synthase I (KAS I) mRNA,; 3-ketoacyl-acyl carrier protein synthase I (KAS I); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, fatty acid synthase activity, catalytic activity; INVOLVED IN: biosynthetic process, metabolic process, fatty acid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta-ketoacyl synthase (InterPro:IPR000794), Beta-ketoacyl synthase, C-terminal (InterPro:IPR014031), 3-oxoacyl-[acyl-carrier-protein] synthase 2 (InterPro:IPR017568), Beta-ketoacyl synthase, N-terminal (InterPro:IPR014030), Beta-ketoacyl synthase, active site (InterPro:IPR018201), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Polyketide synthase, beta-ketoacyl synthase region (InterPro:IPR020841); BEST Arabidopsis thaliana protein match is: fatty acid biosynthesis 1 (TAIR:AT1G74960.3). & (p23902|kasc1_horvu : 638.0) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase I) (KAS I) - Hordeum vulgare (Barley) & (reliability: 1298.0) & (original description: no original description)


Gene families : OG_42_0000557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016597-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
171238 No alias 3-ketoacyl-acyl carrier protein synthase I 0.02 Orthogroups_2024-Update
Glyma.15G181500 No alias fatty acid biosynthesis 1 0.05 Orthogroups_2024-Update
Kfl00372_0060 kfl00372_0060_v1.1 (at1g74960 : 537.0) Encodes a plastidic... 0.02 Orthogroups_2024-Update
LOC_Os04g36800 No alias 3-oxoacyl-synthase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434257g0010 No alias (at5g46290 : 258.0) 3-ketoacyl-acyl carrier protein... 0.07 Orthogroups_2024-Update
MA_326409g0010 No alias (at5g46290 : 420.0) 3-ketoacyl-acyl carrier protein... 0.06 Orthogroups_2024-Update
MA_33567g0010 No alias (at5g46290 : 479.0) 3-ketoacyl-acyl carrier protein... 0.07 Orthogroups_2024-Update
Mp6g02510.1 No alias ketoacyl-ACP synthase II 0.02 Orthogroups_2024-Update
Potri.003G142000 No alias 3-ketoacyl-acyl carrier protein synthase I 0.03 Orthogroups_2024-Update
Pp1s108_176V6 No alias beta-ketoacyl-acp synthase ii 0.03 Orthogroups_2024-Update
Pp1s201_89V6 No alias MPL12.7; 3-oxoacyl-[acyl-carrier-protein] synthase I... 0.02 Orthogroups_2024-Update
Sobic.002G374600.1 No alias ketoacyl-ACP synthase II 0.02 Orthogroups_2024-Update
Solyc12g009260 No alias 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR014030 Ketoacyl_synth_N 66 312
IPR014031 Ketoacyl_synth_C 321 432
No external refs found!