PSME_00016606-RA

Description : (at1g62300 : 138.0) Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.; WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00016606-RA
Cluster	HCCA clusters: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10325	No alias	putative wrky transcription factor 40	0.02	Orthogroups_2024-Update
A4A49_23174	No alias	putative wrky transcription factor 41	0.03	Orthogroups_2024-Update
A4A49_24743	No alias	putative wrky transcription factor 20	0.01	Orthogroups_2024-Update
A4A49_31384	No alias	putative wrky transcription factor 53	0.04	Orthogroups_2024-Update
At1g68150	No alias	WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]	0.03	Orthogroups_2024-Update
At4g31800	No alias	WRKY like transcription factor...	0.02	Orthogroups_2024-Update
Bradi1g08106	No alias	WRKY DNA-binding protein 57	0.03	Orthogroups_2024-Update
Bradi2g05234	No alias	WRKY DNA-binding protein 13	0.04	Orthogroups_2024-Update
Bradi2g18530	No alias	WRKY DNA-binding protein 51	0.03	Orthogroups_2024-Update
Bradi2g22241	No alias	WRKY DNA-binding protein 54	0.03	Orthogroups_2024-Update
Bradi2g42023	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
Bradi3g34850	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi4g01950	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Bradi4g19060	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Bradi4g28280	No alias	WRKY DNA-binding protein 46	0.03	Orthogroups_2024-Update
Bradi4g44342	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
Brara.B03587.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G025895	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G139815	No alias	WRKY DNA-binding protein 30	0.02	Orthogroups_2024-Update
GRMZM2G169966	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.03G220800	No alias	WRKY DNA-binding protein 23	0.02	Orthogroups_2024-Update
Glyma.12G212300	No alias	WRKY DNA-binding protein 69	0.03	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.08	Orthogroups_2024-Update
Glyma.18G242000	No alias	WRKY DNA-binding protein 2	0.04	Orthogroups_2024-Update
Glyma.18G249502	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
HORVU0Hr1G003340.8	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g09100	No alias	WRKY10, expressed	0.01	Orthogroups_2024-Update
MA_10434976g0010	No alias	(at1g69310 : 169.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_23415g0010	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_496691g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_54954g0010	No alias	(at5g26170 : 109.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
MA_7513437g0010	No alias	(at5g26170 : 113.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_93790g0010	No alias	(at1g29860 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00030014-RA	No alias	(at3g01970 : 113.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
Potri.011G087900	No alias	WRKY family transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.013G090300	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Pp1s235_126V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G123100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G202800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G199400.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.008G028600.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G212800.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Solyc02g072190	No alias	WRKY transcription factor 79	0.03	Orthogroups_2024-Update
Solyc02g080890	No alias	WRKY transcription factor 6	0.05	Orthogroups_2024-Update
Solyc08g067340	No alias	WRKY transcription factor 46	0.02	Orthogroups_2024-Update
Solyc08g081610	No alias	WRKY family transcription factor, putative (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc10g005680	No alias	WRKY transcription factor 15	0.02	Orthogroups_2024-Update
Sopen08g029910	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen08g030400	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	157	215

External Links

No external refs found!

PSME_00016606-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation