1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00016902-RA

PSME_00016902-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000720 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016902-RA
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
PSME_00002198-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00014616-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00014714-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00029327-RA No alias (at3g24255 : 82.4) RNA-directed DNA polymerase (reverse... 0.04 Orthogroups_2024-Update
PSME_00036141-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00038292-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00048826-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00053186-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!