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  5. PSME_00016947-RA

PSME_00016947-RA


Description : (at1g65730 : 884.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 1768.0) & (original description: no original description)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00016947-RA
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
A4A49_08226 No alias putative metal-nicotianamine transporter ysl7 0.03 Orthogroups_2024-Update
Brara.H00358.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
GRMZM2G026391 No alias YELLOW STRIPE like 3 0.02 Orthogroups_2024-Update
GRMZM5G893444 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
HORVU2Hr1G090280.4 No alias iron chelator transporter *(YSL) 0.03 Orthogroups_2024-Update
HORVU2Hr1G092820.12 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
HORVU2Hr1G120250.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Orthogroups_2024-Update
Seita.1G254300.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Sobic.006G152900.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.02 Orthogroups_2024-Update
Sopen03g005790 No alias OPT oligopeptide transporter protein 0.03 Orthogroups_2024-Update
Sopen03g022380 No alias OPT oligopeptide transporter protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 75 697
No external refs found!