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  5. PSME_00017009-RA

PSME_00017009-RA


Description : (at3g12770 : 229.0) Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.; mitochondrial editing factor 22 (MEF22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1); Has 43523 Blast hits to 14475 proteins in 290 species: Archae - 0; Bacteria - 15; Metazoa - 148; Fungi - 158; Plants - 42447; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)


Gene families : OG_42_0124064 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017009-RA
Cluster HCCA clusters: Cluster_149


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007050 cell cycle arrest IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 242 263
IPR002885 Pentatricopeptide_repeat 180 197
IPR002885 Pentatricopeptide_repeat 22 69
IPR032867 DYW_dom 354 427
No external refs found!