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  5. PSME_00017011-RA

PSME_00017011-RA


Description : "(at1g65520 : 159.0) encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation; ""delta(3), delta(2)-enoyl CoA isomerase 1"" (ECI1); FUNCTIONS IN: carnitine racemase activity, catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 6860 Blast hits to 6860 proteins in 1261 species: Archae - 142; Bacteria - 4521; Metazoa - 587; Fungi - 178; Plants - 198; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)"


Gene families : OG_42_0002095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017011-RA
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G082330.11 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_10085137g0010 No alias "(at1g65520 : 157.0) encodes a peroxisomal delta3,... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR001753 Enoyl-CoA_hydra/iso 23 199
No external refs found!