PSME_00017013-RA

Description : (at1g76690 : 328.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (reliability: 656.0) & (original description: no original description)

Gene families : OG_42_0000346 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00017013-RA
Cluster	HCCA clusters: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07829	No alias	12-oxophytodienoate reductase 1	0.03	Orthogroups_2024-Update
A4A49_36098	No alias	12-oxophytodienoate reductase 3	0.04	Orthogroups_2024-Update
Bradi1g05870	No alias	12-oxophytodienoate reductase 1	0.05	Orthogroups_2024-Update
Brara.H02826.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.04	Orthogroups_2024-Update
Glyma.11G007600	No alias	12-oxophytodienoate reductase 2	0.02	Orthogroups_2024-Update
Glyma.13G109800	No alias	oxophytodienoate-reductase 3	0.04	Orthogroups_2024-Update
Glyma.19G057500	No alias	12-oxophytodienoate reductase 2	0.06	Orthogroups_2024-Update
HORVU1Hr1G001960.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.06	Orthogroups_2024-Update
HORVU7Hr1G095960.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	Orthogroups_2024-Update
LOC_Os06g11290	No alias	12-oxophytodienoate reductase, putative, expressed	0.04	Orthogroups_2024-Update
MA_10429720g0010	No alias	(at2g06050 : 436.0) Encodes a 12-oxophytodienoate...	0.06	Orthogroups_2024-Update
MA_10435051g0010	No alias	(at1g76690 : 484.0) Encodes one of the closely related...	0.05	Orthogroups_2024-Update
MA_458810g0010	No alias	(at2g06050 : 409.0) Encodes a 12-oxophytodienoate...	0.06	Orthogroups_2024-Update
MA_592495g0010	No alias	(at1g76690 : 532.0) Encodes one of the closely related...	0.04	Orthogroups_2024-Update
PSME_00033362-RA	No alias	(at2g06050 : 403.0) Encodes a 12-oxophytodienoate...	0.04	Orthogroups_2024-Update
PSME_00041285-RA	No alias	(at1g76690 : 527.0) Encodes one of the closely related...	0.04	Orthogroups_2024-Update
PSME_00043045-RA	No alias	(at1g76690 : 558.0) Encodes one of the closely related...	0.04	Orthogroups_2024-Update
PSME_00048660-RA	No alias	(at2g06050 : 419.0) Encodes a 12-oxophytodienoate...	0.05	Orthogroups_2024-Update
Potri.006G142800	No alias	oxophytodienoate-reductase 3	0.03	Orthogroups_2024-Update
Potri.013G102800	No alias	12-oxophytodienoate reductase 2	0.03	Orthogroups_2024-Update
Potri.018G065600	No alias	oxophytodienoate-reductase 3	0.04	Orthogroups_2024-Update
Pp1s1_405V6	No alias	F28O16.5; 12-oxophytodienoate reductase (OPR1)...	0.02	Orthogroups_2024-Update
Pp1s62_139V6	No alias	12-oxophytodienoate reductase	0.05	Orthogroups_2024-Update
Seita.3G070700.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.02	Orthogroups_2024-Update
Seita.4G077800.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.02	Orthogroups_2024-Update
Seita.4G078300.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.04	Orthogroups_2024-Update
Seita.6G173700.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	Orthogroups_2024-Update
Seita.7G109800.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.02	Orthogroups_2024-Update
Sobic.010G084300.1	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor	0.05	Orthogroups_2024-Update
Solyc01g103390	No alias	12-oxophytodienoate reductase 2	0.04	Orthogroups_2024-Update
Solyc11g032220	No alias	12-oxophytodienoate reductase-like protein (AHRD V3.3...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0010181	FMN binding	IEA	InterProScan predictions
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001155	OxRdtase_FMN_N	58	292

External Links

No external refs found!

PSME_00017013-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation