PSME_00017053-RA

Description : (at1g01720 : 241.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7f2l3|nac48_orysa : 241.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (reliability: 442.0) & (original description: no original description)

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00017053-RA
Cluster	HCCA clusters: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
147012	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Brara.A03131.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B03866.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F00161.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F00162.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G068973	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.06G157400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.13G279900	No alias	NAC domain containing protein 3	0.03	Orthogroups_2024-Update
Glyma.13G280000	No alias	NAC domain containing protein 2	0.02	Orthogroups_2024-Update
Glyma.18G301500	No alias	NAC domain containing protein 83	0.03	Orthogroups_2024-Update
HORVU1Hr1G063740.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os05g34600	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_103386g0010	No alias	(q52qh4\|nac68_orysa : 298.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
MA_10434250g0010	No alias	(at2g02450 : 274.0) NAC domain containing protein 35...	0.03	Orthogroups_2024-Update
MA_18153g0010	No alias	(at1g52880 : 291.0) Transcription factor with a NAC...	0.03	Orthogroups_2024-Update
PSME_00001646-RA	No alias	(q52qh4\|nac68_orysa : 185.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00015911-RA	No alias	(at3g04070 : 259.0) NAC domain containing protein 47...	0.05	Orthogroups_2024-Update
PSME_00017634-RA	No alias	(q52qh4\|nac68_orysa : 241.0) NAC domain-containing...	0.04	Orthogroups_2024-Update
PSME_00020753-RA	No alias	(q52qh4\|nac68_orysa : 271.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00027176-RA	No alias	(at1g52880 : 226.0) Transcription factor with a NAC...	0.04	Orthogroups_2024-Update
PSME_00030259-RA	No alias	(q7f2l3\|nac48_orysa : 263.0) NAC domain-containing...	0.06	Orthogroups_2024-Update
PSME_00031194-RA	No alias	(at3g15510 : 222.0) Note of caution: not to be confused...	0.04	Orthogroups_2024-Update
PSME_00050941-RA	No alias	(at4g27410 : 250.0) Encodes a NAC transcription factor...	0.04	Orthogroups_2024-Update
PSME_00051109-RA	No alias	(q52qh4\|nac68_orysa : 257.0) NAC domain-containing...	0.04	Orthogroups_2024-Update
PSME_00051526-RA	No alias	(at1g01720 : 234.0) Belongs to a large family of...	0.04	Orthogroups_2024-Update
Potri.001G404100	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Potri.005G069500	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.009G052300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Seita.3G237100.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G358900.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.8G008100.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G039200.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G040200.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G342100.2	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.008G094700.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sopen05g003630	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	28	154
IPR003441	NAC-dom	211	290

External Links

No external refs found!

PSME_00017053-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation