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  5. PSME_00017195-RA

PSME_00017195-RA


Description : (at3g54140 : 821.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (reliability: 1642.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017195-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
404409 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
411211 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
438080 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
443914 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
At2g40460 No alias Protein NRT1/ PTR FAMILY 5.1... 0.03 Orthogroups_2024-Update
At4g21680 No alias Protein NRT1/ PTR FAMILY 7.2... 0.03 Orthogroups_2024-Update
Bradi2g56397 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g20300 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g20310 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Brara.A02760.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Brara.F00873.1 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.G00995.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.H02669.1 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.I05137.1 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Kfl00057_0100 kfl00057_0100_v1.... (at5g01180 : 590.0) Encodes a dipeptide transporter... 0.01 Orthogroups_2024-Update
LOC_Os01g67630 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g01290 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50950 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g01820.1 No alias anion transporter (NRT1/PTR) 0.03 Orthogroups_2024-Update
PSME_00000440-RA No alias (at2g02040 : 768.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00003460-RA No alias (at3g53960 : 557.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00028295-RA No alias (at3g53960 : 506.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00030783-RA No alias (at3g53960 : 552.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00043344-RA No alias (at3g54140 : 493.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
Potri.019G055800 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Pp1s114_7V6 No alias peptide transporter 0.02 Orthogroups_2024-Update
Pp1s143_133V6 No alias F7J8.160; oligopeptide transporter - like protein... 0.02 Orthogroups_2024-Update
Pp1s173_71V6 No alias peptide transport-like protein 0.02 Orthogroups_2024-Update
Pp1s298_45V6 No alias nitrate transporter 0.02 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Sobic.001G276400.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Sopen07g004440 No alias POT family 0.02 Orthogroups_2024-Update
Sopen07g015340 No alias POT family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 108 539
No external refs found!