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  5. PSME_00017196-RA

PSME_00017196-RA


Description : (at5g01180 : 407.0) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.; peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 814.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017196-RA
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
165561 No alias peptide transporter 1 0.02 Orthogroups_2024-Update
411211 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
438080 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
A4A49_21836 No alias protein nrt1 ptr family 5.1 0.02 Orthogroups_2024-Update
A4A49_23336 No alias protein nrt1 ptr family 7.3 0.02 Orthogroups_2024-Update
Bradi1g68837 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Bradi2g56397 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g28400 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Bradi3g33030 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Bradi3g53380 No alias nitrate transporter 1.5 0.03 Orthogroups_2024-Update
Brara.A02760.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.B02003.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.B03084.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.D02462.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.G02376.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.I05137.1 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
GRMZM2G001764 No alias peptide transporter 3 0.02 Orthogroups_2024-Update
GRMZM2G176253 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G316889 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G296600 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G064900 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G004720.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
HORVU1Hr1G039720.2 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
HORVU1Hr1G053990.10 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
HORVU3Hr1G082300.3 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
LOC_Os01g65110 No alias POT family protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g01290 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g13240 No alias peptide transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g02340 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g22560 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
MA_186200g0010 No alias (at5g46040 : 355.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
MA_24116g0010 No alias (at1g32450 : 662.0) Transmembrane nitrate transporter.... 0.03 Orthogroups_2024-Update
MA_467252g0010 No alias (at3g53960 : 421.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
MA_59489g0010 No alias (at1g32450 : 663.0) Transmembrane nitrate transporter.... 0.03 Orthogroups_2024-Update
PSME_00012571-RA No alias (at3g54140 : 832.0) Encodes a di- and tri-peptide... 0.06 Orthogroups_2024-Update
PSME_00012939-RA No alias (at5g46050 : 614.0) Encodes a di- and tri-peptide... 0.05 Orthogroups_2024-Update
PSME_00017178-RA No alias (at3g54140 : 785.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00019452-RA No alias (at5g46040 : 570.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00047391-RA No alias (at3g53960 : 535.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00047469-RA No alias (at3g53960 : 532.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00048771-RA No alias (at5g46050 : 613.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00048892-RA No alias (at5g46050 : 561.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Potri.013G106700 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Pp1s114_7V6 No alias peptide transporter 0.02 Orthogroups_2024-Update
Pp1s173_71V6 No alias peptide transport-like protein 0.02 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Seita.9G477000.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.001G276600.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.006G201100.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Solyc01g080870 No alias Peptide transporter, putative (AHRD V3.3 *** B9SKJ1_RICCO) 0.03 Orthogroups_2024-Update
Solyc06g050900 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G40460.1) 0.03 Orthogroups_2024-Update
Sopen07g004440 No alias POT family 0.02 Orthogroups_2024-Update
Sopen10g034400 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 166 411
IPR000109 POT_fam 62 140
No external refs found!