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  5. PSME_00017237-RA

PSME_00017237-RA


Description : (at3g25290 : 264.0) Auxin-responsive family protein; INVOLVED IN: multicellular organismal development; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT4G12980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 528.0) & (original description: no original description)


Gene families : OG_42_0000188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017237-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_37795 No alias cytochrome b561 and domon domain-containing protein 0.02 Orthogroups_2024-Update
At3g25290 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 Orthogroups_2024-Update
Bradi2g17067 No alias Cytochrome b561/ferric reductase transmembrane with... 0.03 Orthogroups_2024-Update
Bradi3g35060 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
Glyma.02G306800 No alias Auxin-responsive family protein 0.01 Orthogroups_2024-Update
Glyma.03G257500 No alias Cytochrome b561/ferric reductase transmembrane with... 0.03 Orthogroups_2024-Update
Glyma.17G008000 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G071360.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g48270 No alias auxin-responsive protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G249200 No alias auxin-responsive family protein 0.02 Orthogroups_2024-Update
Potri.006G015000 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
Potri.007G024700 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Solyc09g019980 No alias Cytochrome b561/ferric reductase transmembrane with... 0.03 Orthogroups_2024-Update
Sopen07g024470 No alias Protein of unknown function (DUF568) 0.02 Orthogroups_2024-Update
Sopen09g020510 No alias Protein of unknown function (DUF568) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006593 Cyt_b561/ferric_Rdtase_TM 268 392
IPR005018 DOMON_domain 86 187
No external refs found!