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  5. PSME_00017577-RA

PSME_00017577-RA


Description : (at3g48080 : 222.0) alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity, triglyceride lipase activity, signal transducer activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G48090.1); Has 522 Blast hits to 472 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 484; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 444.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017577-RA
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G013200 No alias senescence-associated gene 101 0.03 Orthogroups_2024-Update
MA_101621g0020 No alias (at3g48090 : 244.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
MA_10426033g0010 No alias (at3g48090 : 208.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 105 205
No external refs found!