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  5. PSME_00017579-RA

PSME_00017579-RA


Description : (at3g52430 : 236.0) Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. Required for the ssi2-dependent heightened resistance to GPA.; PHYTOALEXIN DEFICIENT 4 (PAD4); CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: senescence-associated gene 101 (TAIR:AT5G14930.2); Has 722 Blast hits to 622 proteins in 73 species: Archae - 0; Bacteria - 23; Metazoa - 17; Fungi - 11; Plants - 620; Viruses - 1; Other Eukaryotes - 50 (source: NCBI BLink). & (reliability: 472.0) & (original description: no original description)


Gene families : OG_42_0000580 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017579-RA
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
MA_30999g0010 No alias (at3g48090 : 224.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
MA_75635g0010 No alias (at3g52430 : 182.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
MA_960096g0010 No alias (at3g48090 : 133.0) Component of R gene-mediated disease... 0.03 Orthogroups_2024-Update
MA_978270g0010 No alias (at3g48090 : 135.0) Component of R gene-mediated disease... 0.06 Orthogroups_2024-Update
PSME_00006173-RA No alias (at3g52430 : 140.0) Encodes a lipase-like gene that is... 0.04 Orthogroups_2024-Update
PSME_00009814-RA No alias (at3g48080 : 229.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
PSME_00010078-RA No alias (at3g48080 : 115.0) alpha/beta-Hydrolases superfamily... 0.04 Orthogroups_2024-Update
PSME_00025992-RA No alias (at3g48090 : 91.3) Component of R gene-mediated disease... 0.07 Orthogroups_2024-Update
PSME_00031893-RA No alias (at3g48080 : 241.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
PSME_00037904-RA No alias (at3g52430 : 118.0) Encodes a lipase-like gene that is... 0.03 Orthogroups_2024-Update
Potri.001G290600 No alias senescence-associated gene 101 0.02 Orthogroups_2024-Update
Potri.005G068700 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 128 245
No external refs found!