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  5. PSME_00017638-RA

PSME_00017638-RA


Description : (at4g26200 : 558.0) Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.; 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 33519 Blast hits to 33516 proteins in 2975 species: Archae - 937; Bacteria - 23616; Metazoa - 672; Fungi - 820; Plants - 1333; Viruses - 0; Other Eukaryotes - 6141 (source: NCBI BLink). & (q00257|1a12_cucma : 558.0) 1-aminocyclopropane-1-carboxylate synthase CMA101 (EC 4.4.1.14) (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) - Cucurbita maxima (Pumpkin) (Winter squash) & (reliability: 1116.0) & (original description: no original description)


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017638-RA
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_01413 No alias 1-aminocyclopropane-1-carboxylate synthase 3 0.02 Orthogroups_2024-Update
A4A49_24774 No alias 1-aminocyclopropane-1-carboxylate synthase 0.04 Orthogroups_2024-Update
A4A49_28180 No alias 1-aminocyclopropane-1-carboxylate synthase 0.04 Orthogroups_2024-Update
A4A49_38026 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_57945 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
At2g22810 No alias 1-aminocyclopropane-1-carboxylate synthase 4... 0.03 Orthogroups_2024-Update
At4g08040 No alias 1-aminocyclopropane-1-carboxylate synthase 11... 0.04 Orthogroups_2024-Update
At5g65800 No alias ETO2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQM2] 0.03 Orthogroups_2024-Update
Brara.B03968.1 No alias EC_4.4 carbon-sulfur lyase &... 0.06 Orthogroups_2024-Update
Brara.H01734.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
GRMZM2G164405 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.04 Orthogroups_2024-Update
GRMZM5G894619 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.04 Orthogroups_2024-Update
Glyma.01G196100 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
Glyma.07G065700 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
Glyma.16G032200 No alias ACC synthase 1 0.02 Orthogroups_2024-Update
Glyma.18G238100 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G094230.2 No alias EC_4.4 carbon-sulfur lyase 0.04 Orthogroups_2024-Update
LOC_Os03g51740 No alias aminotransferase, classes I and II, domain containing... 0.02 Orthogroups_2024-Update
MA_10375359g0010 No alias (at4g26200 : 342.0) Member of a family of proteins in... 0.04 Orthogroups_2024-Update
MA_121240g0010 No alias (at4g26200 : 551.0) Member of a family of proteins in... 0.06 Orthogroups_2024-Update
MA_17005g0010 No alias (q00257|1a12_cucma : 566.0)... 0.04 Orthogroups_2024-Update
PSME_00007298-RA No alias (at4g26200 : 603.0) Member of a family of proteins in... 0.04 Orthogroups_2024-Update
PSME_00036726-RA No alias (at4g26200 : 552.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
PSME_00048891-RA No alias (q00257|1a12_cucma : 494.0)... 0.03 Orthogroups_2024-Update
Potri.002G113900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.02 Orthogroups_2024-Update
Potri.002G163700 No alias ACC synthase 1 0.03 Orthogroups_2024-Update
Sobic.001G105900.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Sobic.006G187900.1 No alias EC_4.4 carbon-sulfur lyase &... 0.06 Orthogroups_2024-Update
Sobic.010G020800.1 No alias EC_4.4 carbon-sulfur lyase 0.03 Orthogroups_2024-Update
Solyc03g043890 No alias 1-aminocyclopropane-1-carboxylate synthase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 63 444
No external refs found!