1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00017659-RA

PSME_00017659-RA


Description : (at5g56300 : 224.0) A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.; gibberellic acid methyltransferase 2 (GAMT2); CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26420.1); Has 919 Blast hits to 907 proteins in 123 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 5; Plants - 719; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink). & (q9fyz9|bamt_antma : 137.0) Benzoate carboxyl methyltransferase (EC 2.1.1.-) (S-adenosyl-L-methionine:benzoic acid carboxyl methyltransferase) - Antirrhinum majus (Garden snapdragon) & (reliability: 448.0) & (original description: no original description)


Gene families : OG_42_0000061 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017659-RA
Cluster HCCA clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
At5g04370 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
Bradi3g05550 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.04 Orthogroups_2024-Update
Brara.I00485.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Glyma.02G053900 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 Orthogroups_2024-Update
MA_10259819g0010 No alias (at5g56300 : 259.0) A member of the Arabidopsis SABATH... 0.02 Orthogroups_2024-Update
MA_25646g0010 No alias (at5g55250 : 225.0) Encodes an enzyme which specifically... 0.03 Orthogroups_2024-Update
PSME_00037223-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sobic.010G037200.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
evm.model.tig00000796.12 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005299 MeTrfase_7 100 362
No external refs found!