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  5. Sopen05g028790

Sopen05g028790


Description : Ion transport protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g028790
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
A4A49_22015 No alias putative cyclic nucleotide-gated ion channel 15 0.03 Orthogroups_2024-Update
A4A49_24346 No alias cyclic nucleotide-gated ion channel 2 0.03 Orthogroups_2024-Update
Bradi3g09550 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
Brara.A02980.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.J00905.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
GRMZM5G858887 No alias Cyclic nucleotide-regulated ion channel family protein 0.02 Orthogroups_2024-Update
Glyma.06G184000 No alias cyclic nucleotide-gated channel 16 0.02 Orthogroups_2024-Update
Glyma.09G168500 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Glyma.13G141000 No alias cyclic nucleotide-gated channel 15 0.02 Orthogroups_2024-Update
Glyma.16G218000 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Glyma.19G255300 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
HORVU6Hr1G044300.2 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
PSME_00037092-RA No alias (at5g54250 : 808.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Potri.004G212300 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
Potri.015G034000 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Potri.017G089900 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Seita.1G014200.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Seita.1G336400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Seita.5G341100.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.001G083800.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.04 Orthogroups_2024-Update
Solyc12g010010 No alias Cyclic nucleotide-gated ion channel, putative (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 98 421
No external refs found!