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  5. PSME_00017767-RA

PSME_00017767-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000720 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017767-RA
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
PSME_00006073-RA No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00010669-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00011214-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00011599-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00014714-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00015013-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00016903-RA No alias (at1g74930 : 114.0) encodes a member of the DREB... 0.01 Orthogroups_2024-Update
PSME_00020507-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00021111-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00023509-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00027045-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00052080-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 158 223
IPR002156 RNaseH_domain 310 397
No external refs found!