Description : (at5g05390 : 660.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 216.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1320.0) & (original description: no original description)
Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00017834-RA | |
Cluster | HCCA clusters: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_67291g0010 | No alias | (at5g05390 : 697.0) putative laccase, a member of... | 0.02 | Orthogroups_2024-Update | |
PSME_00008073-RA | No alias | (at2g38080 : 619.0) Encodes a protein with similarity to... | 0.04 | Orthogroups_2024-Update | |
PSME_00023647-RA | No alias | (at5g60020 : 698.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00039922-RA | No alias | (at5g60020 : 722.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00042445-RA | No alias | (at5g03260 : 679.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00042619-RA | No alias | (at5g05390 : 581.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
Seita.3G297100.1 | No alias | EC_1.10 oxidoreductase acting on diphenol or related... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEA | InterProScan predictions |
MF | GO:0016491 | oxidoreductase activity | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004126 | cytidine deaminase activity | IEP | Predicted GO |
BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0006216 | cytidine catabolic process | IEP | Predicted GO |
MF | GO:0008146 | sulfotransferase activity | IEP | Predicted GO |
BP | GO:0009164 | nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0009972 | cytidine deamination | IEP | Predicted GO |
MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Predicted GO |
BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Predicted GO |
BP | GO:0042454 | ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046087 | cytidine metabolic process | IEP | Predicted GO |
BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Predicted GO |
BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Predicted GO |
BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901658 | glycosyl compound catabolic process | IEP | Predicted GO |
No external refs found! |