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  5. PSME_00017885-RA

PSME_00017885-RA


Description : (at3g03740 : 169.0) BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00017885-RA
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Bradi4g23747 No alias BTB-POZ and MATH domain 2 0.04 Orthogroups_2024-Update
HORVU1Hr1G039140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G106560.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G107980.3 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00042785-RA No alias (at3g03740 : 159.0) BTB-POZ and MATH domain 4 (BPM4);... 0.05 Orthogroups_2024-Update
Potri.010G199200 No alias BTB/POZ/MATH-domains containing protein 0.02 Orthogroups_2024-Update
Seita.7G010200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G198500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G158100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G080900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G222300.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 47 158
No external refs found!