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  5. PSME_00018015-RA

PSME_00018015-RA


Description : (q9fqy8|comt1_capan : 332.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Capsicum annuum (Bell pepper) & (at5g54160 : 308.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 616.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018015-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
96831 No alias O-methyltransferase 1 0.02 Orthogroups_2024-Update
A4A49_03214 No alias caffeic acid 3-o-methyltransferase 0.03 Orthogroups_2024-Update
Bradi2g50111 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Brara.B02157.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.F01513.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Brara.F03756.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Brara.G01120.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
GRMZM2G082007 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
GRMZM2G085924 No alias O-methyltransferase family protein 0.04 Orthogroups_2024-Update
GRMZM2G100754 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.06G286700 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.06G295700 No alias O-methyltransferase 1 0.04 Orthogroups_2024-Update
Glyma.08G248000 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.10G176600 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G076050.1 No alias EC_2.1 transferase transferring one-carbon group 0.05 Orthogroups_2024-Update
Kfl00216_0100 kfl00216_0100_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os11g20040 No alias O-methyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g13810 No alias caffeic acid 3-O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426470g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10432299g0010 No alias (p45986|imt1_mescr : 130.0) Inositol 4-methyltransferase... 0.04 Orthogroups_2024-Update
MA_10432987g0020 No alias (p28002|comt1_medsa : 228.0) Caffeic acid... 0.04 Orthogroups_2024-Update
MA_165197g0010 No alias (q8w013|comt1_catro : 372.0) Caffeic acid... 0.04 Orthogroups_2024-Update
MA_1665780g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_5226589g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_76956g0010 No alias (q9fqy8|comt1_capan : 399.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_86945g0010 No alias (at5g54160 : 94.7) A caffeic acid/5-hydroxyferulic acid... 0.04 Orthogroups_2024-Update
MA_9917746g0010 No alias (q9fqy8|comt1_capan : 178.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00015141-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00035775-RA No alias (q8w013|comt1_catro : 165.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00041841-RA No alias (q8w013|comt1_catro : 270.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00045308-RA No alias (p28002|comt1_medsa : 243.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00052715-RA No alias (p28002|comt1_medsa : 235.0) Caffeic acid... 0.03 Orthogroups_2024-Update
Potri.004G050400 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Seita.1G045400.1 No alias EC_2.1 transferase transferring one-carbon group 0.06 Orthogroups_2024-Update
Seita.3G179100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.6G148100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.7G073700.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.8G093200.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Sobic.005G216200.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Sobic.010G230800.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.010G231000.2 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Solyc02g077530 No alias O-methyltransferase, putative (AHRD V3.3 *** B9S932_RICCO) 0.04 Orthogroups_2024-Update
Solyc10g047520 No alias LOW QUALITY:O-methyltransferase (AHRD V3.3 *-* Q6VMV7_MENPI) 0.03 Orthogroups_2024-Update
Solyc12g009110 No alias O-methyltransferase, putative (AHRD V3.3 *** B9SUX6_RICCO) 0.04 Orthogroups_2024-Update
Sopen06g020340 No alias O-methyltransferase 0.02 Orthogroups_2024-Update
Sopen10g035230 No alias O-methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 143 245
IPR001077 O_MeTrfase_2 249 325
IPR012967 Plant_MeTrfase_dimerisation 35 87
No external refs found!