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  5. PSME_00018080-RA

PSME_00018080-RA


Description : (at4g39700 : 213.0) Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT1G22990.1); Has 1218 Blast hits to 1176 proteins in 83 species: Archae - 0; Bacteria - 23; Metazoa - 6; Fungi - 46; Plants - 1141; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). & (reliability: 426.0) & (original description: no original description)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018080-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_11785 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At4g35060 No alias HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323] 0.03 Orthogroups_2024-Update
Glyma.09G045200 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
MA_111506g0010 No alias (at4g39700 : 170.0) Heavy metal transport/detoxification... 0.04 Orthogroups_2024-Update
MA_9120066g0010 No alias (at3g56891 : 105.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
MA_927203g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00025351-RA No alias (at4g39700 : 159.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
PSME_00026105-RA No alias (at1g71050 : 114.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
PSME_00052361-RA No alias (at1g22990 : 144.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
Potri.008G128400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G144300 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Sopen11g003110 No alias Heavy-metal-associated domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 32 86
No external refs found!