PSME_00018186-RA

Description : (at5g50380 : 89.4) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.; exocyst subunit exo70 family protein F1 (EXO70F1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: plasma membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D3 (TAIR:AT3G14090.1); Has 952 Blast hits to 944 proteins in 146 species: Archae - 0; Bacteria - 2; Metazoa - 140; Fungi - 117; Plants - 671; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). & (reliability: 176.4) & (original description: no original description)

Gene families : OG_42_0000104 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00018186-RA
Cluster	HCCA clusters: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23660	No alias	exocyst complex component exo70b1	0.04	Orthogroups_2024-Update
At2g39380	No alias	Exocyst subunit exo70 family protein H2...	0.03	Orthogroups_2024-Update
Bradi2g59057	No alias	exocyst subunit exo70 family protein D3	0.03	Orthogroups_2024-Update
Cre10.g421250	No alias	exocyst subunit exo70 family protein A2	0.02	Orthogroups_2024-Update
GRMZM2G076389	No alias	exocyst subunit exo70 family protein D1	0.05	Orthogroups_2024-Update
GRMZM5G869403	No alias	exocyst subunit exo70 family protein B1	0.04	Orthogroups_2024-Update
Glyma.02G232100	No alias	exocyst subunit exo70 family protein B1	0.03	Orthogroups_2024-Update
Glyma.06G203900	No alias	exocyst subunit exo70 family protein E2	0.03	Orthogroups_2024-Update
Glyma.14G199200	No alias	exocyst subunit exo70 family protein B1	0.03	Orthogroups_2024-Update
Glyma.15G042400	No alias	exocyst subunit exo70 family protein H7	0.02	Orthogroups_2024-Update
LOC_Os09g26820	No alias	exo70 exocyst complex subunit, putative, expressed	0.04	Orthogroups_2024-Update
MA_12790g0040	No alias	(at1g72470 : 279.0) A member of EXO70 gene family,...	0.04	Orthogroups_2024-Update
PSME_00018183-RA	No alias	(at3g14090 : 365.0) A member of EXO70 gene family,...	0.03	Orthogroups_2024-Update
Potri.006G203900	No alias	exocyst subunit exo70 family protein A2	0.03	Orthogroups_2024-Update
Potri.013G152900	No alias	exocyst subunit exo70 family protein B1	0.03	Orthogroups_2024-Update
Potri.017G093700	No alias	exocyst subunit exo70 family protein E1	0.03	Orthogroups_2024-Update
Seita.1G167500.1	No alias	component *(EXO70) of Exocyst complex	0.04	Orthogroups_2024-Update
Sobic.007G148700.1	No alias	component *(EXO70) of Exocyst complex	0.03	Orthogroups_2024-Update
Sobic.007G194400.1	No alias	component *(EXO70) of Exocyst complex	0.03	Orthogroups_2024-Update
Sobic.009G171000.1	No alias	component *(EXO70) of Exocyst complex	0.05	Orthogroups_2024-Update
Solyc02g094370	No alias	No description available	0.04	Orthogroups_2024-Update
Solyc06g062990	No alias	Exocyst subunit EXO70 family protein (AHRD V3.3 *** B9N7F2_POPTR)	0.02	Orthogroups_2024-Update
Sopen06g032010	No alias	Exo70 exocyst complex subunit	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006887	exocytosis	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044448	cell cortex part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0099023	tethering complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004140	Exo70	132	217

External Links

No external refs found!

PSME_00018186-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation