Description : (at1g60560 : 118.0) SWIM zinc finger family protein; BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT4G13970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 236.0) & (original description: no original description)
Gene families : OG_42_0004674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004674_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00018286-RA | |
Cluster | HCCA clusters: Cluster_143 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PSME_00000002-RA | No alias | (at1g60560 : 122.0) SWIM zinc finger family protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00015766-RA | No alias | (at4g13970 : 122.0) zinc ion binding; FUNCTIONS IN: zinc... | 0.05 | Orthogroups_2024-Update | |
PSME_00022142-RA | No alias | (at4g13970 : 262.0) zinc ion binding; FUNCTIONS IN: zinc... | 0.04 | Orthogroups_2024-Update | |
PSME_00027977-RA | No alias | (at1g60560 : 152.0) SWIM zinc finger family protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00033102-RA | No alias | no hits & (original description: no original description) | 0.04 | Orthogroups_2024-Update | |
PSME_00033881-RA | No alias | (at1g60560 : 171.0) SWIM zinc finger family protein;... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
MF | GO:0004521 | endoribonuclease activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
MF | GO:0008430 | selenium binding | IEP | Predicted GO |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007527 | Znf_SWIM | 215 | 244 |
No external refs found! |