1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00018289-RA

PSME_00018289-RA


Description : (at5g07050 : 402.0) nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G40900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 804.0) & (original description: no original description)


Gene families : OG_42_0000223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018289-RA

Target Alias Description ECC score Gene Family Method Actions
At1g44800 No alias WAT1-related protein At1g44800... 0.03 Orthogroups_2024-Update
At4g08300 No alias WAT1-related protein At4g08300... 0.02 Orthogroups_2024-Update
Brara.G00254.1 No alias solute transporter *(UmamiT) 0.03 Orthogroups_2024-Update
Brara.G01060.1 No alias solute transporter *(UmamiT) 0.03 Orthogroups_2024-Update
Brara.I03895.1 No alias solute transporter *(UmamiT) 0.04 Orthogroups_2024-Update
Brara.J00639.1 No alias solute transporter *(UmamiT) 0.03 Orthogroups_2024-Update
Glyma.04G250600 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 Orthogroups_2024-Update
Glyma.08G076700 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 Orthogroups_2024-Update
Glyma.10G044800 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 Orthogroups_2024-Update
Glyma.14G151600 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 Orthogroups_2024-Update
LOC_Os01g58910 No alias auxin-induced protein 5NG4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g10750 No alias integral membrane protein DUF6 containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g14920 No alias integral membrane protein DUF6 containing protein, expressed 0.02 Orthogroups_2024-Update
MA_130040g0010 No alias (at5g07050 : 407.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
MA_13078g0020 No alias (at5g07050 : 319.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
MA_452260g0010 No alias (at3g18200 : 172.0) nodulin MtN21 /EamA-like transporter... 0.03 Orthogroups_2024-Update
MA_96547g0010 No alias (at1g44800 : 230.0) nodulin MtN21 /EamA-like transporter... 0.04 Orthogroups_2024-Update
PSME_00032999-RA No alias (at5g07050 : 390.0) nodulin MtN21 /EamA-like transporter... 0.06 Orthogroups_2024-Update
PSME_00041947-RA No alias (at5g07050 : 419.0) nodulin MtN21 /EamA-like transporter... 0.04 Orthogroups_2024-Update
Potri.001G032500 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 Orthogroups_2024-Update
Potri.006G033500 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 Orthogroups_2024-Update
Solyc10g080980 No alias WAT1-related protein (AHRD V3.3 *** K4D2Y5_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000620 EamA_dom 167 305
No external refs found!