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  5. PSME_00018444-RA

PSME_00018444-RA


Description : (at1g22640 : 194.0) MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression; myb domain protein 3 (MYB3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 6 (TAIR:AT4G09460.1); Has 9176 Blast hits to 8476 proteins in 489 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 510; Plants - 6085; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink). & (p20025|myb38_maize : 177.0) Myb-related protein Zm38 - Zea mays (Maize) & (reliability: 388.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018444-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Brara.B00668.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G158700 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Glyma.13G203100 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
HORVU3Hr1G063460.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.05 Orthogroups_2024-Update
LOC_Os09g36250 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_94467g0010 No alias (at3g13540 : 228.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00021355-RA No alias "(at2g47460 : 196.0) ""MYB12 belongs to subgroup 7 of... 0.05 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
Potri.015G041100 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s211_139V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.04 Orthogroups_2024-Update
Pp1s46_302V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Solyc01g010910 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRK4_SALMI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 89 134
IPR001005 SANT/Myb 35 83
No external refs found!