Sopen05g029310

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g029310
Cluster	HCCA clusters: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method
409196	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
412693	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
A4A49_28100	No alias	ethylene-responsive transcription factor erf017	0.03	Orthogroups_2024-Update
A4A49_35008	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
At1g68550	No alias	Ethylene-responsive transcription factor ERF118...	0.03	Orthogroups_2024-Update
At2g46310	No alias	Ethylene-responsive transcription factor CRF5...	0.03	Orthogroups_2024-Update
At5g11590	No alias	Dehydration-responsive element-binding protein 3...	0.03	Orthogroups_2024-Update
Brara.B02236.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.05	Orthogroups_2024-Update
Brara.G00521.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Glyma.05G062100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G028300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G044300	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Glyma.13G233900	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G099670.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
MA_10434101g0010	No alias	(at1g19210 : 101.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_10436654g0010	No alias	(at1g74930 : 110.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Mp6g08690.1	No alias	transcription factor (DREB)	0.03	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
PSME_00021283-RA	No alias	(at5g21960 : 119.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
PSME_00046682-RA	No alias	(at3g16770 : 96.3) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
PSME_00050917-RA	No alias	(at1g74930 : 122.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00057235-RA	No alias	(at5g11590 : 122.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.02	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Pp1s149_253V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s21_247V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s53_80V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.4G016400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.03	Orthogroups_2024-Update
Solyc06g050520	No alias	dehydration responsive element binding protein 1	0.04	Orthogroups_2024-Update
Solyc12g005960	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.04	Orthogroups_2024-Update
Sopen03g002330	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	73	122

External Links

No external refs found!

Sopen05g029310

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation