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  5. PSME_00018508-RA

PSME_00018508-RA


Description : (at3g28630 : 175.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF569) (TAIR:AT3G01311.1); Has 232 Blast hits to 210 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 350.0) & (original description: no original description)


Gene families : OG_42_0001184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018508-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
At1g59710 No alias Actin cross-linking protein (DUF569)... 0.03 Orthogroups_2024-Update
Brara.H02172.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G040400 No alias Actin cross-linking protein 0.03 Orthogroups_2024-Update
Glyma.02G024200 No alias Actin cross-linking protein 0.02 Orthogroups_2024-Update
Glyma.08G294800 No alias Actin cross-linking protein 0.03 Orthogroups_2024-Update
Glyma.13G065800 No alias Protein of unknown function (DUF569) 0.03 Orthogroups_2024-Update
Potri.010G035100 No alias Actin cross-linking protein 0.03 Orthogroups_2024-Update
Solyc02g067510 No alias Actin cross-linking protein, putative (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc02g087580 No alias Actin cross-linking (AHRD V3.3 *** A0A103Y4S4_CYNCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007679 DUF569 18 158
No external refs found!