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  5. PSME_00018559-RA

PSME_00018559-RA


Description : (at1g76680 : 485.0) Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 1 (OPR1); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, developing seed stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 970.0) & (original description: no original description)


Gene families : OG_42_0000346 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018559-RA
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
270843 No alias 12-oxophytodienoate reductase 2 0.03 Orthogroups_2024-Update
A4A49_36098 No alias 12-oxophytodienoate reductase 3 0.03 Orthogroups_2024-Update
Brara.C04059.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update
Brara.H02826.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.04 Orthogroups_2024-Update
Glyma.13G109800 No alias oxophytodienoate-reductase 3 0.05 Orthogroups_2024-Update
LOC_Os06g11290 No alias 12-oxophytodienoate reductase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10429720g0010 No alias (at2g06050 : 436.0) Encodes a 12-oxophytodienoate... 0.03 Orthogroups_2024-Update
MA_10435051g0010 No alias (at1g76690 : 484.0) Encodes one of the closely related... 0.03 Orthogroups_2024-Update
MA_458810g0010 No alias (at2g06050 : 409.0) Encodes a 12-oxophytodienoate... 0.03 Orthogroups_2024-Update
MA_566408g0010 No alias (at2g06050 : 443.0) Encodes a 12-oxophytodienoate... 0.03 Orthogroups_2024-Update
Pp1s1158_3V6 No alias 12-oxophytodienoate reductase 3 0.03 Orthogroups_2024-Update
Seita.4G078100.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.03 Orthogroups_2024-Update
Sobic.006G091600.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G084300.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor 0.05 Orthogroups_2024-Update
Solyc01g103390 No alias 12-oxophytodienoate reductase 2 0.02 Orthogroups_2024-Update
Solyc11g032220 No alias 12-oxophytodienoate reductase-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001155 OxRdtase_FMN_N 19 339
No external refs found!