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  5. PSME_00018608-RA

PSME_00018608-RA


Description : (at1g68410 : 352.0) Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 704.0) & (original description: no original description)


Gene families : OG_42_0000712 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018608-RA
Cluster HCCA clusters: Cluster_456

Target Alias Description ECC score Gene Family Method Actions
109752 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Brara.F00579.1 No alias clade H phosphatase 0.02 Orthogroups_2024-Update
Glyma.14G082200 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G054610.2 No alias clade H phosphatase 0.02 Orthogroups_2024-Update
Seita.7G117000.1 No alias clade H phosphatase 0.03 Orthogroups_2024-Update
Seita.9G433400.1 No alias clade H phosphatase 0.06 Orthogroups_2024-Update
Solyc07g024020 No alias Protein phosphatase 2C family protein (AHRD V3.3 *** AT1G47380.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 2 198
No external refs found!