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  5. PSME_00018609-RA

PSME_00018609-RA


Description : (at4g19420 : 395.0) Pectinacetylesterase family protein; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.1); Has 543 Blast hits to 535 proteins in 96 species: Archae - 2; Bacteria - 44; Metazoa - 119; Fungi - 0; Plants - 298; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018609-RA
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
447382 No alias Pectinacetylesterase family protein 0.04 Orthogroups_2024-Update
A4A49_14015 No alias pectin acetylesterase 5 0.02 Orthogroups_2024-Update
Glyma.03G227600 No alias Pectinacetylesterase family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G101640.8 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
MA_3303g0010 No alias (at5g23870 : 345.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
PSME_00035414-RA No alias (at3g05910 : 345.0) Pectinacetylesterase family protein;... 0.08 Orthogroups_2024-Update
Seita.5G410500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G150700.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Solyc08g075020 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT4G19420.2) 0.02 Orthogroups_2024-Update
Solyc10g038130 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT2G46930.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 67 302
IPR004963 PAE/NOTUM 306 403
No external refs found!