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  5. PSME_00018710-RA

PSME_00018710-RA


Description : (at1g69550 : 113.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 226.0) & (original description: no original description)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018710-RA
Cluster HCCA clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
429055 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Orthogroups_2024-Update
A4A49_16283 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_29374 No alias tmv resistance protein n 0.05 Orthogroups_2024-Update
A4A49_34609 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g63730 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At2g17060 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
At3g04220 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
At5g48780 No alias Disease resistance protein (TIR-NBS class)... 0.03 Orthogroups_2024-Update
Brara.B02905.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.C00456.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.C00509.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.D01151.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.H01709.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Glyma.02G284200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.06G264300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.06G310000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.07G067900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.10G184400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.12G132200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.12G240100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.15G160900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.16G159600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G214500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
LOC_Os11g38000 No alias NB-ARC domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10428569g0010 No alias (at1g27170 : 499.0) transmembrane receptors;ATP binding;... 0.04 Orthogroups_2024-Update
MA_129800g0010 No alias (at1g27170 : 178.0) transmembrane receptors;ATP binding;... 0.06 Orthogroups_2024-Update
PSME_00006143-RA No alias (at5g36930 : 223.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00041991-RA No alias (at1g27180 : 111.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
Potri.001G066500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.008G220200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G012900 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.014G064100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.017G105500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.019G002601 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.T001933 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T004950 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T010500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T038900 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.T077100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Pp1s145_93V6 No alias leucine-rich repeat-containing 0.03 Orthogroups_2024-Update
Pp1s223_83V6 No alias tmv resistance protein 0.03 Orthogroups_2024-Update
Solyc01g014840 No alias disease resistance protein (TIR-NBS-LRR class) (AHRD... 0.04 Orthogroups_2024-Update
Solyc05g024350 No alias LOW QUALITY:NBS-LRR resistance protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g096900 No alias Disease resistance protein (TIR-NBS-LRR class) (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 2 95
IPR002182 NB-ARC 127 258
No external refs found!