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  5. PSME_00018725-RA

PSME_00018725-RA


Description : (at3g13060 : 159.0) evolutionarily conserved C-terminal region 5 (ECT5); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 2 (TAIR:AT3G13460.4); Has 1288 Blast hits to 1234 proteins in 189 species: Archae - 0; Bacteria - 12; Metazoa - 605; Fungi - 140; Plants - 385; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)


Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00018725-RA

Target Alias Description ECC score Gene Family Method Actions
At1g48110 No alias evolutionarily conserved C-terminal region 7... 0.02 Orthogroups_2024-Update
Glyma.17G038400 No alias evolutionarily conserved C-terminal region 7 0.02 Orthogroups_2024-Update
LOC_Os04g04000 No alias ECT protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g44200 No alias ECT5, putative, expressed 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 236 363
No external refs found!